Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.88□□□□□ -0.35
SRP9P49458 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.88□□□□□ -0.35
SRP9P49458 RPSAP52-203ENST00000622976 1023 ntBASIC12.88□□□□□ -0.35
SRP9P49458 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.88□□□□□ -0.35
SRP9P49458 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.88□□□□□ -0.35
SRP9P49458 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
SRP9P49458 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.87□□□□□ -0.35
SRP9P49458 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.87□□□□□ -0.35
SRP9P49458 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.87□□□□□ -0.35
SRP9P49458 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.87□□□□□ -0.35
SRP9P49458 RN7SL832P-201ENST00000607781 1756 ntBASIC12.87□□□□□ -0.35
SRP9P49458 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.87□□□□□ -0.35
SRP9P49458 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.87□□□□□ -0.35
SRP9P49458 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.87□□□□□ -0.35
SRP9P49458 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.87□□□□□ -0.35
SRP9P49458 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 BOLA2P3-201ENST00000404566 256 ntBASIC12.87□□□□□ -0.35
SRP9P49458 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.87□□□□□ -0.35
SRP9P49458 AC234783.1-201ENST00000441761 496 ntBASIC12.87□□□□□ -0.35
SRP9P49458 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.87□□□□□ -0.35
SRP9P49458 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 AC106886.1-201ENST00000568660 600 ntBASIC12.87□□□□□ -0.35
SRP9P49458 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.87□□□□□ -0.35
SRP9P49458 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.87□□□□□ -0.35
SRP9P49458 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.87□□□□□ -0.35
SRP9P49458 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 AC145423.3-201ENST00000615987 467 ntBASIC12.87□□□□□ -0.35
SRP9P49458 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.87□□□□□ -0.35
SRP9P49458 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
SRP9P49458 PEG13-201ENST00000631594 5667 ntBASIC12.87□□□□□ -0.35
SRP9P49458 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SRP9P49458 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
SRP9P49458 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.87□□□□□ -0.35
SRP9P49458 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 AL137783.1-201ENST00000623494 1896 ntBASIC12.87□□□□□ -0.35
SRP9P49458 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRP9P49458 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.87□□□□□ -0.35
SRP9P49458 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.87□□□□□ -0.35
SRP9P49458 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.86□□□□□ -0.35
SRP9P49458 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.86□□□□□ -0.35
SRP9P49458 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SRP9P49458 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SRP9P49458 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 MSTO2P-201ENST00000314835 1709 ntBASIC12.86□□□□□ -0.35
SRP9P49458 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
SRP9P49458 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SRP9P49458 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.86□□□□□ -0.35
SRP9P49458 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.86□□□□□ -0.35
SRP9P49458 TMEM14DP-201ENST00000422205 345 ntBASIC12.86□□□□□ -0.35
SRP9P49458 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.86□□□□□ -0.35
SRP9P49458 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRP9P49458 AC016694.1-201ENST00000434179 700 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms