Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA5P30532 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA5P30532 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA5P30532 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 GH1-203ENST00000351388 685 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 HDGF-202ENST00000368206 960 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA5P30532 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHRNA5P30532 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA5P30532 AL773545.2-201ENST00000442149 472 ntBASIC17.31■□□□□ 0.36
CHRNA5P30532 AC133141.1-201ENST00000443015 339 ntBASIC17.31■□□□□ 0.36
CHRNA5P30532 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA5P30532 GULOP-201ENST00000454030 748 ntBASIC17.31■□□□□ 0.36
CHRNA5P30532 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA5P30532 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 AP000920.1-201ENST00000531824 344 ntBASIC17.31■□□□□ 0.36
CHRNA5P30532 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA5P30532 CSTP2-201ENST00000610599 398 ntBASIC17.31■□□□□ 0.36
CHRNA5P30532 AC245369.7-201ENST00000631386 350 ntBASIC17.31■□□□□ 0.36
CHRNA5P30532 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA5P30532 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA5P30532 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA5P30532 FAM226B-201ENST00000602508 1490 ntBASIC17.31■□□□□ 0.36
CHRNA5P30532 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHRNA5P30532 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHRNA5P30532 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHRNA5P30532 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA5P30532 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA5P30532 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 FDPSP7-201ENST00000429043 1054 ntBASIC17.3■□□□□ 0.36
CHRNA5P30532 EEF1DP2-201ENST00000433698 843 ntBASIC17.3■□□□□ 0.36
CHRNA5P30532 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA5P30532 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA5P30532 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA5P30532 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA5P30532 AC004923.3-201ENST00000527532 355 ntBASIC17.3■□□□□ 0.36
CHRNA5P30532 INO80E-209ENST00000567254 625 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA5P30532 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA5P30532 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRNA5P30532 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 MIR6125-201ENST00000618986 96 ntBASIC17.3■□□□□ 0.36
CHRNA5P30532 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHRNA5P30532 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHRNA5P30532 AL050341.2-201ENST00000567508 1541 ntBASIC17.3■□□□□ 0.36
CHRNA5P30532 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA5P30532 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA5P30532 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHRNA5P30532 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA5P30532 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA5P30532 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA5P30532 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA5P30532 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA5P30532 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA5P30532 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA5P30532 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRNA5P30532 HLA-DMA-202ENST00000395303 1007 ntBASIC17.29■□□□□ 0.36
CHRNA5P30532 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA5P30532 GGTLC4P-201ENST00000402176 664 ntBASIC17.29■□□□□ 0.36
CHRNA5P30532 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC17.29■□□□□ 0.36
CHRNA5P30532 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA5P30532 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA5P30532 IGKV1OR-2-201ENST00000457995 350 ntBASIC17.29■□□□□ 0.36
CHRNA5P30532 RN7SL578P-201ENST00000477781 283 ntBASIC17.29■□□□□ 0.36
CHRNA5P30532 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRNA5P30532 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNA5P30532 AC132812.1-201ENST00000583145 892 ntBASIC17.29■□□□□ 0.36
CHRNA5P30532 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRNA5P30532 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA5P30532 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA5P30532 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNA5P30532 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRNA5P30532 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNA5P30532 SALL4P6-201ENST00000429385 1691 ntBASIC17.29■□□□□ 0.36
CHRNA5P30532 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms