Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AP001065.2-201ENST00000617205 644 ntBASIC16.71■□□□□ 0.27
ERCC3P19447 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ERCC3P19447 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ERCC3P19447 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
ERCC3P19447 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
ERCC3P19447 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.71■□□□□ 0.27
ERCC3P19447 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.71■□□□□ 0.27
ERCC3P19447 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
ERCC3P19447 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.71■□□□□ 0.27
ERCC3P19447 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC3P19447 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ERCC3P19447 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.71■□□□□ 0.26
ERCC3P19447 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ERCC3P19447 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.71■□□□□ 0.26
ERCC3P19447 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 KRT8P31-201ENST00000504812 1408 ntBASIC16.7■□□□□ 0.26
ERCC3P19447 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ERCC3P19447 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC3P19447 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 AC097376.2-205ENST00000610159 5334 ntBASIC16.7■□□□□ 0.26
ERCC3P19447 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.7■□□□□ 0.26
ERCC3P19447 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ERCC3P19447 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 AL627422.1-201ENST00000434104 580 ntBASIC16.7■□□□□ 0.26
ERCC3P19447 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC3P19447 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC3P19447 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.7■□□□□ 0.26
ERCC3P19447 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.7■□□□□ 0.26
ERCC3P19447 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
ERCC3P19447 RPL17P45-201ENST00000586289 509 ntBASIC16.7■□□□□ 0.26
ERCC3P19447 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ERCC3P19447 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC3P19447 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ERCC3P19447 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ERCC3P19447 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC3P19447 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC3P19447 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
ERCC3P19447 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ERCC3P19447 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 AC139712.1-201ENST00000378256 1875 ntBASIC16.69■□□□□ 0.26
ERCC3P19447 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 AL390755.1-201ENST00000623716 2027 ntBASIC16.69■□□□□ 0.26
ERCC3P19447 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC3P19447 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ERCC3P19447 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC3P19447 AL355334.1-201ENST00000417713 215 ntBASIC16.69■□□□□ 0.26
ERCC3P19447 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.69■□□□□ 0.26
ERCC3P19447 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.69■□□□□ 0.26
ERCC3P19447 DUX4L50-201ENST00000455245 715 ntBASIC16.69■□□□□ 0.26
ERCC3P19447 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms