Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.36□□□□□ -0.11
NELFEP18615 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NELFEP18615 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.35□□□□□ -0.11
NELFEP18615 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 AL354877.1-201ENST00000424412 413 ntBASIC14.35□□□□□ -0.11
NELFEP18615 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.35□□□□□ -0.11
NELFEP18615 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.35□□□□□ -0.11
NELFEP18615 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.35□□□□□ -0.11
NELFEP18615 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.35□□□□□ -0.11
NELFEP18615 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 AC007663.3-201ENST00000609632 465 ntBASIC14.35□□□□□ -0.11
NELFEP18615 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NELFEP18615 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NELFEP18615 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.35□□□□□ -0.11
NELFEP18615 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.35□□□□□ -0.11
NELFEP18615 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
NELFEP18615 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.34□□□□□ -0.11
NELFEP18615 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
NELFEP18615 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.34□□□□□ -0.11
NELFEP18615 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.34□□□□□ -0.11
NELFEP18615 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
NELFEP18615 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.34□□□□□ -0.11
NELFEP18615 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NELFEP18615 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.34□□□□□ -0.11
NELFEP18615 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NELFEP18615 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.34□□□□□ -0.11
NELFEP18615 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.34□□□□□ -0.11
NELFEP18615 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NELFEP18615 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.34□□□□□ -0.11
NELFEP18615 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.34□□□□□ -0.11
NELFEP18615 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.34□□□□□ -0.11
NELFEP18615 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NELFEP18615 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.34□□□□□ -0.11
NELFEP18615 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.34□□□□□ -0.11
NELFEP18615 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.34□□□□□ -0.11
NELFEP18615 MIR4683-201ENST00000579659 81 ntBASIC14.34□□□□□ -0.11
NELFEP18615 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.34□□□□□ -0.11
NELFEP18615 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.34□□□□□ -0.11
NELFEP18615 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.34□□□□□ -0.11
NELFEP18615 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NELFEP18615 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms