Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC005632.3-201ENST00000605544 308 ntBASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC009560.1-201ENST00000620208 434 ntBASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 MIR6727-201ENST00000620702 65 ntBASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC011491.1-203ENST00000637688 543 ntBASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC006504.5-208ENST00000588784 2401 ntBASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.58□□□□□ -0.23
RAB40ALP0C0E4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.58□□□□□ -0.23
RAB40ALP0C0E4 AC041040.2-201ENST00000622926 2899 ntBASIC13.58□□□□□ -0.23
RAB40ALP0C0E4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 AC078991.1-201ENST00000437297 610 ntBASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 CHCHD2P9-201ENST00000461726 456 ntBASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 AC140658.4-201ENST00000561990 352 ntBASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 MIR5572-201ENST00000583188 137 ntBASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 AC092171.5-201ENST00000608012 942 ntBASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 AC021016.3-201ENST00000608367 477 ntBASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 BX640514.1-201ENST00000583223 1918 ntBASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40ALP0C0E4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms