Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 AC134684.3-201ENST00000641758 218 ntBASIC16.23■□□□□ 0.19
TPM3P06753 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 AL805961.2-201ENST00000642139 4817 ntBASIC16.23■□□□□ 0.19
TPM3P06753 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.23■□□□□ 0.19
TPM3P06753 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC16.23■□□□□ 0.19
TPM3P06753 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 AC139712.1-201ENST00000378256 1875 ntBASIC16.22■□□□□ 0.19
TPM3P06753 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 AL138725.1-201ENST00000407347 1314 ntBASIC16.22■□□□□ 0.19
TPM3P06753 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TPM3P06753 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM3P06753 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TPM3P06753 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 C1QBPP1-201ENST00000400117 770 ntBASIC16.22■□□□□ 0.19
TPM3P06753 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.22■□□□□ 0.19
TPM3P06753 AC004967.1-201ENST00000453589 447 ntBASIC16.22■□□□□ 0.19
TPM3P06753 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.22■□□□□ 0.19
TPM3P06753 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM3P06753 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM3P06753 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.22■□□□□ 0.19
TPM3P06753 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.22■□□□□ 0.19
TPM3P06753 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 AC009407.1-201ENST00000568958 598 ntBASIC16.22■□□□□ 0.19
TPM3P06753 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.22■□□□□ 0.19
TPM3P06753 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM3P06753 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM3P06753 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.22■□□□□ 0.19
TPM3P06753 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TPM3P06753 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.22■□□□□ 0.19
TPM3P06753 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TPM3P06753 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TPM3P06753 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM3P06753 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM3P06753 AL359845.1-201ENST00000458202 1648 ntBASIC16.21■□□□□ 0.19
TPM3P06753 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 TSSK5P-201ENST00000423978 907 ntBASIC16.21■□□□□ 0.19
TPM3P06753 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM3P06753 SPDYE18-201ENST00000510091 1050 ntBASIC16.21■□□□□ 0.19
TPM3P06753 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.21■□□□□ 0.19
TPM3P06753 AC104596.2-201ENST00000512793 793 ntBASIC16.21■□□□□ 0.19
TPM3P06753 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM3P06753 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 AC103988.2-201ENST00000561804 725 ntBASIC16.21■□□□□ 0.19
TPM3P06753 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TPM3P06753 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.21■□□□□ 0.19
TPM3P06753 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TPM3P06753 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.21■□□□□ 0.19
TPM3P06753 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
TPM3P06753 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms