Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.5□□□□□ -0.57
APOC3P02656 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
APOC3P02656 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.5□□□□□ -0.57
APOC3P02656 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.5□□□□□ -0.57
APOC3P02656 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.5□□□□□ -0.57
APOC3P02656 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.5□□□□□ -0.57
APOC3P02656 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.5□□□□□ -0.57
APOC3P02656 ANKRD20A6P-201ENST00000618763 204 ntBASIC11.5□□□□□ -0.57
APOC3P02656 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.5□□□□□ -0.57
APOC3P02656 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.5□□□□□ -0.57
APOC3P02656 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC3P02656 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 NBPF17P-201ENST00000401087 2119 ntBASIC11.5□□□□□ -0.57
APOC3P02656 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC3P02656 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
APOC3P02656 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
APOC3P02656 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC3P02656 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.49□□□□□ -0.57
APOC3P02656 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.49□□□□□ -0.57
APOC3P02656 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 COX11P1-201ENST00000489116 835 ntBASIC11.49□□□□□ -0.57
APOC3P02656 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
APOC3P02656 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.49□□□□□ -0.57
APOC3P02656 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 BAP1-211ENST00000615113 489 ntBASIC11.49□□□□□ -0.57
APOC3P02656 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC3P02656 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC3P02656 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
APOC3P02656 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC3P02656 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC3P02656 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms