Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 AC009093.10-201ENST00000641956 1442 ntBASIC12.85□□□□□ -0.35
APOC1P02654 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 AL590440.2-201ENST00000641973 1595 ntBASIC12.85□□□□□ -0.35
APOC1P02654 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 LINC01230-201ENST00000625222 3017 ntBASIC12.85□□□□□ -0.35
APOC1P02654 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 MSTO2P-201ENST00000314835 1709 ntBASIC12.85□□□□□ -0.35
APOC1P02654 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.85□□□□□ -0.35
APOC1P02654 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.85□□□□□ -0.35
APOC1P02654 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOC1P02654 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC1P02654 PCDHA5-203ENST00000614258 4248 ntBASIC12.84□□□□□ -0.35
APOC1P02654 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 AP001972.5-201ENST00000624624 2338 ntBASIC12.84□□□□□ -0.35
APOC1P02654 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC1P02654 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
APOC1P02654 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.84□□□□□ -0.35
APOC1P02654 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC1P02654 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.84□□□□□ -0.35
APOC1P02654 AC016694.1-201ENST00000434179 700 ntBASIC12.84□□□□□ -0.35
APOC1P02654 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
APOC1P02654 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.84□□□□□ -0.35
APOC1P02654 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 AC106820.3-201ENST00000561653 397 ntBASIC12.84□□□□□ -0.35
APOC1P02654 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC1P02654 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.84□□□□□ -0.35
APOC1P02654 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.84□□□□□ -0.35
APOC1P02654 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.84□□□□□ -0.35
APOC1P02654 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
APOC1P02654 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC1P02654 AC020910.5-201ENST00000623668 1865 ntBASIC12.84□□□□□ -0.35
APOC1P02654 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
APOC1P02654 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
APOC1P02654 NUTM2HP-201ENST00000442076 2498 ntBASIC12.84□□□□□ -0.35
APOC1P02654 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
APOC1P02654 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.84□□□□□ -0.35
APOC1P02654 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOC1P02654 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
APOC1P02654 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOC1P02654 AC016397.2-201ENST00000624848 1985 ntBASIC12.83□□□□□ -0.35
APOC1P02654 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOC1P02654 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
APOC1P02654 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
APOC1P02654 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOC1P02654 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms