Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-CO1P00395 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MT-CO1P00395 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MT-CO1P00395 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
MT-CO1P00395 MIR769-201ENST00000390225 118 ntBASIC14.8□□□□□ -0.04
MT-CO1P00395 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
MT-CO1P00395 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.8□□□□□ -0.04
MT-CO1P00395 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.8□□□□□ -0.04
MT-CO1P00395 RN7SL11P-201ENST00000471305 293 ntBASIC14.8□□□□□ -0.04
MT-CO1P00395 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.8□□□□□ -0.04
MT-CO1P00395 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
MT-CO1P00395 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.8□□□□□ -0.04
MT-CO1P00395 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.8□□□□□ -0.04
MT-CO1P00395 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MT-CO1P00395 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MT-CO1P00395 AL157813.1-201ENST00000612996 587 ntBASIC14.8□□□□□ -0.04
MT-CO1P00395 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.8□□□□□ -0.04
MT-CO1P00395 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 AC008132.1-202ENST00000342005 1389 ntBASIC14.8□□□□□ -0.04
MT-CO1P00395 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
MT-CO1P00395 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-CO1P00395 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-CO1P00395 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-CO1P00395 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MT-CO1P00395 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-CO1P00395 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MT-CO1P00395 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MT-CO1P00395 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-CO1P00395 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.79□□□□□ -0.04
MT-CO1P00395 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-CO1P00395 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MT-CO1P00395 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 SLC25A24P2-201ENST00000415059 510 ntBASIC14.79□□□□□ -0.04
MT-CO1P00395 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 AL008707.1-201ENST00000422498 534 ntBASIC14.79□□□□□ -0.04
MT-CO1P00395 XBP1P1-201ENST00000436573 652 ntBASIC14.79□□□□□ -0.04
MT-CO1P00395 ST13P19-201ENST00000442505 1124 ntBASIC14.79□□□□□ -0.04
MT-CO1P00395 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MT-CO1P00395 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-CO1P00395 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.79□□□□□ -0.04
MT-CO1P00395 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.79□□□□□ -0.04
MT-CO1P00395 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
MT-CO1P00395 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.79□□□□□ -0.04
MT-CO1P00395 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.79□□□□□ -0.04
MT-CO1P00395 SORD2P-201ENST00000558556 1069 ntBASIC14.79□□□□□ -0.04
MT-CO1P00395 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.79□□□□□ -0.04
MT-CO1P00395 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.79□□□□□ -0.04
MT-CO1P00395 AP001505.2-201ENST00000616815 443 ntBASIC14.79□□□□□ -0.04
MT-CO1P00395 AC011498.7-201ENST00000624986 2027 ntBASIC14.79□□□□□ -0.04
MT-CO1P00395 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.79□□□□□ -0.04
MT-CO1P00395 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MT-CO1P00395 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MT-CO1P00395 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.78□□□□□ -0.04
MT-CO1P00395 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.78□□□□□ -0.04
MT-CO1P00395 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.78□□□□□ -0.04
MT-CO1P00395 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
MT-CO1P00395 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms