Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC6.18□□□□□ -1.42
USH2AO75445 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC6.18□□□□□ -1.42
USH2AO75445 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC6.18□□□□□ -1.42
USH2AO75445 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC6.18□□□□□ -1.42
USH2AO75445 MIR5091-201ENST00000578707 93 ntBASIC6.18□□□□□ -1.42
USH2AO75445 SKA2-205ENST00000580541 689 ntTSL 3 BASIC6.18□□□□□ -1.42
USH2AO75445 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 AC106872.9-201ENST00000512437 1393 ntBASIC6.18□□□□□ -1.42
USH2AO75445 AC034205.3-201ENST00000603595 1376 ntBASIC6.18□□□□□ -1.42
USH2AO75445 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USH2AO75445 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USH2AO75445 RPL5P21-201ENST00000404620 815 ntBASIC6.18□□□□□ -1.42
USH2AO75445 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 MTND6P4-201ENST00000506002 522 ntBASIC6.18□□□□□ -1.42
USH2AO75445 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USH2AO75445 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 AC015688.4-201ENST00000580780 1647 ntBASIC6.17□□□□□ -1.42
USH2AO75445 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 C18orf15-201ENST00000623680 2534 ntBASIC6.17□□□□□ -1.42
USH2AO75445 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 OR2W2P-201ENST00000406313 909 ntBASIC6.17□□□□□ -1.42
USH2AO75445 OR7E155P-201ENST00000412208 1014 ntBASIC6.17□□□□□ -1.42
USH2AO75445 AP001331.1-201ENST00000413008 1015 ntBASIC6.17□□□□□ -1.42
USH2AO75445 TMEM256P1-201ENST00000430550 340 ntBASIC6.17□□□□□ -1.42
USH2AO75445 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
USH2AO75445 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC6.17□□□□□ -1.42
USH2AO75445 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC6.17□□□□□ -1.42
USH2AO75445 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC6.17□□□□□ -1.42
USH2AO75445 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC6.17□□□□□ -1.42
USH2AO75445 AC022296.3-201ENST00000608823 403 ntBASIC6.17□□□□□ -1.42
USH2AO75445 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC6.17□□□□□ -1.42
USH2AO75445 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 AL356583.1-201ENST00000398739 1371 ntBASIC6.17□□□□□ -1.42
USH2AO75445 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC6.17□□□□□ -1.42
USH2AO75445 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
USH2AO75445 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
USH2AO75445 KLK8-203ENST00000347619 555 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 PGK1P2-201ENST00000431702 1214 ntBASIC6.17□□□□□ -1.42
USH2AO75445 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC6.17□□□□□ -1.42
USH2AO75445 SSR3-202ENST00000463503 596 ntTSL 4 BASIC6.17□□□□□ -1.42
USH2AO75445 RN7SL351P-201ENST00000469306 248 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms