Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCN2BO60939 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCN2BO60939 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.68□□□□□ -0.22
SCN2BO60939 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.68□□□□□ -0.22
SCN2BO60939 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SCN2BO60939 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCN2BO60939 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCN2BO60939 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SCN2BO60939 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.68□□□□□ -0.22
SCN2BO60939 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCN2BO60939 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SCN2BO60939 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCN2BO60939 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SCN2BO60939 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
SCN2BO60939 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SCN2BO60939 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SCN2BO60939 AC020658.7-201ENST00000624274 2442 ntBASIC13.68□□□□□ -0.22
SCN2BO60939 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SCN2BO60939 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.67□□□□□ -0.22
SCN2BO60939 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 TCAF1P1-201ENST00000414990 2232 ntBASIC13.67□□□□□ -0.22
SCN2BO60939 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 MIR326-201ENST00000362220 95 ntBASIC13.67□□□□□ -0.22
SCN2BO60939 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.67□□□□□ -0.22
SCN2BO60939 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.67□□□□□ -0.22
SCN2BO60939 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.67□□□□□ -0.22
SCN2BO60939 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.67□□□□□ -0.22
SCN2BO60939 AL645933.1-201ENST00000440087 609 ntBASIC13.67□□□□□ -0.22
SCN2BO60939 ST13P19-201ENST00000442505 1124 ntBASIC13.67□□□□□ -0.22
SCN2BO60939 TTTY23B-201ENST00000442790 549 ntBASIC13.67□□□□□ -0.22
SCN2BO60939 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.67□□□□□ -0.22
SCN2BO60939 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
SCN2BO60939 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.67□□□□□ -0.22
SCN2BO60939 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.67□□□□□ -0.22
SCN2BO60939 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 MIR4783-201ENST00000580343 82 ntBASIC13.67□□□□□ -0.22
SCN2BO60939 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SCN2BO60939 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.67□□□□□ -0.22
SCN2BO60939 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SCN2BO60939 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.67□□□□□ -0.22
SCN2BO60939 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SCN2BO60939 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.66□□□□□ -0.22
SCN2BO60939 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.66□□□□□ -0.22
SCN2BO60939 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SCN2BO60939 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SCN2BO60939 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.66□□□□□ -0.22
SCN2BO60939 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCN2BO60939 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.66□□□□□ -0.22
SCN2BO60939 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.66□□□□□ -0.22
SCN2BO60939 AL512384.1-201ENST00000406683 331 ntBASIC13.66□□□□□ -0.22
SCN2BO60939 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.66□□□□□ -0.22
SCN2BO60939 AL157407.1-201ENST00000435784 904 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms