Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.81□□□□□ -0.52
SSSCA1O60232 AL022313.4-201ENST00000562756 2046 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SSSCA1O60232 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 USP17L6P-201ENST00000382470 1197 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 EIF3FP3-201ENST00000434851 1086 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 FDX1P1-201ENST00000449115 551 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 GIMAP3P-201ENST00000495150 836 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 AP001582.1-201ENST00000525856 295 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.8□□□□□ -0.52
SSSCA1O60232 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 KRT18P8-201ENST00000581937 1246 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 SPDYE22P-201ENST00000582158 798 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.8□□□□□ -0.52
SSSCA1O60232 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.8□□□□□ -0.52
SSSCA1O60232 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 MKRN5P-201ENST00000445263 1467 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.8□□□□□ -0.52
SSSCA1O60232 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 AC064801.2-201ENST00000625052 1303 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SSSCA1O60232 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 AC011481.3-201ENST00000623895 5594 ntBASIC11.8□□□□□ -0.52
SSSCA1O60232 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.8□□□□□ -0.52
SSSCA1O60232 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SSSCA1O60232 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 AP000437.1-201ENST00000624057 2085 ntBASIC11.79□□□□□ -0.52
SSSCA1O60232 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms