Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 RFNG-202ENST00000429557 994 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 RBM14-205ENST00000443702 732 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 OR4A49P-201ENST00000527050 632 ntBASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 AL136298.3-201ENST00000556746 445 ntBASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 AC139100.2-201ENST00000616901 662 ntBASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 MIEF1-215ENST00000637854 213 ntBASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM88BA6NKF7 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 CD37-203ENST00000426897 1204 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 AC074019.1-201ENST00000428788 1096 ntBASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 EEF1DP2-201ENST00000433698 843 ntBASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 AC022121.1-201ENST00000484584 579 ntBASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM88BA6NKF7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 KRT8P38-201ENST00000441370 1430 ntBASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 AC112693.3-201ENST00000624819 1983 ntBASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 AL591499.1-201ENST00000307155 1153 ntBASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 JPT1-205ENST00000470924 663 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 AL512310.5-201ENST00000551999 515 ntBASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM88BA6NKF7 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 285.5 ms