Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AL023775.1-201ENST00000454907 1746 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AP002761.4-201ENST00000565433 3361 ntBASIC12.36□□□□□ -0.43
TMEM235A6NFC5 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 USP17L6P-201ENST00000382470 1197 ntBASIC12.36□□□□□ -0.43
TMEM235A6NFC5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 AC104596.2-201ENST00000512793 793 ntBASIC12.36□□□□□ -0.43
TMEM235A6NFC5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 AL359711.2-201ENST00000563105 872 ntBASIC12.36□□□□□ -0.43
TMEM235A6NFC5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 MIR8072-201ENST00000614241 80 ntBASIC12.36□□□□□ -0.43
TMEM235A6NFC5 AC093028.1-201ENST00000622998 982 ntBASIC12.36□□□□□ -0.43
TMEM235A6NFC5 AC008761.3-201ENST00000624803 892 ntBASIC12.36□□□□□ -0.43
TMEM235A6NFC5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TMEM235A6NFC5 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 AC125807.2-201ENST00000513358 3514 ntBASIC12.35□□□□□ -0.43
TMEM235A6NFC5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
TMEM235A6NFC5 MEP1AP4-201ENST00000423244 1087 ntBASIC12.35□□□□□ -0.43
TMEM235A6NFC5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms