Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 AC022616.1-201ENST00000518688 554 ntBASIC15.74■□□□□ 0.11
CCDC66A2RUB6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 AL390955.2-201ENST00000603032 514 ntBASIC15.74■□□□□ 0.11
CCDC66A2RUB6 AC004790.1-201ENST00000612686 536 ntBASIC15.74■□□□□ 0.11
CCDC66A2RUB6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 AC102953.2-201ENST00000609755 3026 ntBASIC15.74■□□□□ 0.11
CCDC66A2RUB6 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 AC107375.1-201ENST00000564464 2231 ntBASIC15.74■□□□□ 0.11
CCDC66A2RUB6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC66A2RUB6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 AC134915.1-201ENST00000426461 574 ntBASIC15.73■□□□□ 0.11
CCDC66A2RUB6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 AL512638.1-201ENST00000457493 794 ntBASIC15.73■□□□□ 0.11
CCDC66A2RUB6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 AC120045.2-201ENST00000567334 178 ntBASIC15.73■□□□□ 0.11
CCDC66A2RUB6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC66A2RUB6 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC66A2RUB6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms