Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HFM1A2PYH4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 AGAP10P-201ENST00000454844 2418 ntBASIC20.84■□□□□ 0.93
HFM1A2PYH4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 NT5C-204ENST00000578337 582 ntTSL 2 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 LINC00244-201ENST00000625073 613 ntBASIC20.84■□□□□ 0.93
HFM1A2PYH4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HFM1A2PYH4 AL009178.2-201ENST00000597278 2719 ntBASIC20.84■□□□□ 0.93
HFM1A2PYH4 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HFM1A2PYH4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HFM1A2PYH4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HFM1A2PYH4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HFM1A2PYH4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HFM1A2PYH4 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HFM1A2PYH4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HFM1A2PYH4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HFM1A2PYH4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HFM1A2PYH4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 CTBP2P4-201ENST00000513884 920 ntBASIC20.83■□□□□ 0.93
HFM1A2PYH4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HFM1A2PYH4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HFM1A2PYH4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HFM1A2PYH4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC20.83■□□□□ 0.92
HFM1A2PYH4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC20.83■□□□□ 0.92
HFM1A2PYH4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HFM1A2PYH4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HFM1A2PYH4 AC023794.5-201ENST00000564380 2157 ntBASIC20.83■□□□□ 0.92
HFM1A2PYH4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC20.83■□□□□ 0.92
HFM1A2PYH4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HFM1A2PYH4 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 NRADDP-202ENST00000641269 1585 ntBASIC20.82■□□□□ 0.92
HFM1A2PYH4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 MIR4326-201ENST00000582203 59 ntBASIC20.82■□□□□ 0.92
HFM1A2PYH4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 AC002044.2-201ENST00000624910 970 ntBASIC20.82■□□□□ 0.92
HFM1A2PYH4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HFM1A2PYH4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
HFM1A2PYH4 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms