Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 FKBP4P6-201ENST00000457486 1332 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 BEND3P3-201ENST00000611030 2440 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 AC009093.10-201ENST00000641956 1442 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 AGAP12P-201ENST00000585227 2359 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 AC055876.3-201ENST00000431496 288 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 AL512638.1-201ENST00000457493 794 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 FTLP10-202ENST00000505798 471 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 ENPP7P5-201ENST00000541031 1031 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 AP001063.1-201ENST00000568332 529 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 AC138649.4-201ENST00000612222 287 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 SLC7A15P-201ENST00000424028 1363 ntBASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2D4Q9Y2X8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2D4Q9Y2X8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 238.2 ms