Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PHF8Q9UPP1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 CDCA4P4-201ENST00000435216 680 ntBASIC19.21■□□□□ 0.67
PHF8Q9UPP1 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 COQ10BP2-201ENST00000513804 724 ntBASIC19.21■□□□□ 0.67
PHF8Q9UPP1 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PHF8Q9UPP1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 SIRPB3P-201ENST00000340424 1216 ntBASIC19.2■□□□□ 0.66
PHF8Q9UPP1 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 AC027612.2-202ENST00000445955 1199 ntBASIC19.2■□□□□ 0.66
PHF8Q9UPP1 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 FTLP5-201ENST00000586853 534 ntBASIC19.2■□□□□ 0.66
PHF8Q9UPP1 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 PTPN20CP-201ENST00000614090 920 ntBASIC19.2■□□□□ 0.66
PHF8Q9UPP1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHF8Q9UPP1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 TCAF2P1-201ENST00000291129 2421 ntBASIC19.19■□□□□ 0.66
PHF8Q9UPP1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 HMGA1P1-201ENST00000415560 1062 ntBASIC19.19■□□□□ 0.66
PHF8Q9UPP1 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 CD81-209ENST00000492627 886 ntTSL 3 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 IGHEP1-201ENST00000521393 651 ntBASIC19.19■□□□□ 0.66
PHF8Q9UPP1 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PHF8Q9UPP1 AC022726.2-201ENST00000634673 547 ntBASIC19.19■□□□□ 0.66
PHF8Q9UPP1 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms