Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SCN11AQ9UI33 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC17.91■□□□□ 0.46
SCN11AQ9UI33 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN11AQ9UI33 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.91■□□□□ 0.46
SCN11AQ9UI33 AL591424.3-201ENST00000614278 872 ntBASIC17.91■□□□□ 0.46
SCN11AQ9UI33 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.91■□□□□ 0.46
SCN11AQ9UI33 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCN11AQ9UI33 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN11AQ9UI33 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN11AQ9UI33 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCN11AQ9UI33 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.9■□□□□ 0.46
SCN11AQ9UI33 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.9■□□□□ 0.46
SCN11AQ9UI33 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 AC106881.1-201ENST00000605849 3329 ntBASIC17.9■□□□□ 0.46
SCN11AQ9UI33 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN11AQ9UI33 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SCN11AQ9UI33 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 AC104961.1-201ENST00000427605 771 ntBASIC17.89■□□□□ 0.45
SCN11AQ9UI33 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 BAK1P2-201ENST00000532665 631 ntBASIC17.89■□□□□ 0.45
SCN11AQ9UI33 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 KF455155.1-201ENST00000604493 303 ntBASIC17.89■□□□□ 0.45
SCN11AQ9UI33 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 AC064850.1-201ENST00000413279 1398 ntBASIC17.89■□□□□ 0.45
SCN11AQ9UI33 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 RPSAP6-201ENST00000417882 882 ntBASIC17.89■□□□□ 0.45
SCN11AQ9UI33 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.89■□□□□ 0.45
SCN11AQ9UI33 MIR4746-201ENST00000579802 71 ntBASIC17.89■□□□□ 0.45
SCN11AQ9UI33 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 SNORA50C-201ENST00000408535 133 ntBASIC17.88■□□□□ 0.45
SCN11AQ9UI33 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 AC041040.1-201ENST00000425197 460 ntBASIC17.88■□□□□ 0.45
SCN11AQ9UI33 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 RPL29P2-202ENST00000498671 657 ntBASIC17.88■□□□□ 0.45
SCN11AQ9UI33 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.88■□□□□ 0.45
SCN11AQ9UI33 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms