Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 E2F3P2-201ENST00000447755 1422 ntBASIC12.27□□□□□ -0.45
CLN8Q9UBY8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.27□□□□□ -0.45
CLN8Q9UBY8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 KRT8P13-201ENST00000463294 1010 ntBASIC12.26□□□□□ -0.45
CLN8Q9UBY8 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 AC106794.1-201ENST00000506935 792 ntBASIC12.26□□□□□ -0.45
CLN8Q9UBY8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 AC005730.2-201ENST00000564549 1184 ntBASIC12.26□□□□□ -0.45
CLN8Q9UBY8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 AC009955.4-201ENST00000597192 544 ntBASIC12.26□□□□□ -0.45
CLN8Q9UBY8 AL162426.1-201ENST00000624141 743 ntBASIC12.26□□□□□ -0.45
CLN8Q9UBY8 AC244452.3-201ENST00000636814 210 ntBASIC12.26□□□□□ -0.45
CLN8Q9UBY8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLN8Q9UBY8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.25□□□□□ -0.45
CLN8Q9UBY8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLN8Q9UBY8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms