Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 BAP1-211ENST00000615113 489 ntBASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 LINC02486-201ENST00000604157 3000 ntBASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 AC015818.8-201ENST00000587907 1519 ntBASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS29Q9UBQ0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
VPS29Q9UBQ0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
VPS29Q9UBQ0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS29Q9UBQ0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS29Q9UBQ0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS29Q9UBQ0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VPS29Q9UBQ0 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 DMBT1P1-203ENST00000636837 4628 ntBASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 AC012441.2-201ENST00000444843 739 ntBASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 AC100827.2-201ENST00000563214 1194 ntBASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.83□□□□□ -0.2
VPS29Q9UBQ0 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
VPS29Q9UBQ0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms