Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DNMT3BQ9UBC3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AC006987.1-201ENST00000413610 527 ntBASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 TPT1P11-201ENST00000458482 498 ntBASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 C2orf69P1-201ENST00000563532 1093 ntBASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AC141586.1-203ENST00000567242 366 ntBASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AC104506.1-201ENST00000609247 429 ntBASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AC006158.1-201ENST00000610661 249 ntBASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AC113367.3-201ENST00000508316 1912 ntBASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
DNMT3BQ9UBC3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 AC002044.2-201ENST00000624910 970 ntBASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DNMT3BQ9UBC3 AC005840.4-201ENST00000541242 2494 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms