Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 AC128714.1-201ENST00000637035 887 ntBASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 KRT8P31-201ENST00000504812 1408 ntBASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
HMG20BQ9P0W2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 CCT8L1P-201ENST00000465400 1674 ntBASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 KRT17P5-201ENST00000332088 839 ntBASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 MIR557-201ENST00000385239 98 ntBASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 AL627231.1-201ENST00000394467 1125 ntBASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 OR8T1P-201ENST00000421347 918 ntBASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 MAGEA5-201ENST00000446757 942 ntBASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 AC019193.1-201ENST00000506678 823 ntBASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMG20BQ9P0W2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AC117489.1-201ENST00000625169 3217 ntBASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 AL583805.1-201ENST00000391389 531 ntBASIC17.44■□□□□ 0.38
HMG20BQ9P0W2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms