Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 AC107375.1-201ENST00000564464 2231 ntBASIC17.31■□□□□ 0.36
RTN4Q9NQC3 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RTN4Q9NQC3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.3■□□□□ 0.36
RTN4Q9NQC3 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 AL354714.2-201ENST00000425270 1097 ntBASIC17.3■□□□□ 0.36
RTN4Q9NQC3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 AC111000.5-201ENST00000506559 1178 ntBASIC17.3■□□□□ 0.36
RTN4Q9NQC3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 AC092902.6-201ENST00000641783 218 ntBASIC17.3■□□□□ 0.36
RTN4Q9NQC3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.3■□□□□ 0.36
RTN4Q9NQC3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 SCG3-202ENST00000542355 2163 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 HLA-H-201ENST00000383620 1096 ntBASIC17.29■□□□□ 0.36
RTN4Q9NQC3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 SPCS2P4-201ENST00000436160 681 ntBASIC17.29■□□□□ 0.36
RTN4Q9NQC3 AC006355.1-201ENST00000440982 1012 ntBASIC17.29■□□□□ 0.36
RTN4Q9NQC3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 FAM86C2P-203ENST00000528684 1004 ntBASIC17.29■□□□□ 0.36
RTN4Q9NQC3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4Q9NQC3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN4Q9NQC3 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC17.28■□□□□ 0.36
RTN4Q9NQC3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms