Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC123567.1-201ENST00000548294 1261 ntBASIC16.12■□□□□ 0.17
CBX8Q9HC52 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX8Q9HC52 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX8Q9HC52 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX8Q9HC52 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX8Q9HC52 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX8Q9HC52 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX8Q9HC52 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX8Q9HC52 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX8Q9HC52 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX8Q9HC52 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX8Q9HC52 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 DLX4-206ENST00000611342 1662 ntBASIC16.11■□□□□ 0.17
CBX8Q9HC52 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 AP003969.2-201ENST00000623739 2275 ntBASIC16.11■□□□□ 0.17
CBX8Q9HC52 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 ENPP7P5-201ENST00000541031 1031 ntBASIC16.11■□□□□ 0.17
CBX8Q9HC52 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 AC131212.3-201ENST00000624087 4219 ntBASIC16.11■□□□□ 0.17
CBX8Q9HC52 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX8Q9HC52 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CBX8Q9HC52 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 AC024075.2-201ENST00000598112 1473 ntBASIC16.1■□□□□ 0.17
CBX8Q9HC52 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 AC068587.3-201ENST00000526613 355 ntBASIC16.1■□□□□ 0.17
CBX8Q9HC52 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms