Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRM3Q9HC36 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.4□□□□□ -0.1
MRM3Q9HC36 AL023803.2-201ENST00000620080 638 ntBASIC14.4□□□□□ -0.1
MRM3Q9HC36 AL359183.1-201ENST00000623796 2132 ntBASIC14.4□□□□□ -0.1
MRM3Q9HC36 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MRM3Q9HC36 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRM3Q9HC36 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
MRM3Q9HC36 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.4□□□□□ -0.1
MRM3Q9HC36 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.4□□□□□ -0.1
MRM3Q9HC36 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.4□□□□□ -0.1
MRM3Q9HC36 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRM3Q9HC36 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRM3Q9HC36 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.4□□□□□ -0.1
MRM3Q9HC36 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRM3Q9HC36 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.4□□□□□ -0.1
MRM3Q9HC36 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MRM3Q9HC36 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRM3Q9HC36 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.4□□□□□ -0.1
MRM3Q9HC36 SBF1P1-201ENST00000444527 5631 ntBASIC14.4□□□□□ -0.1
MRM3Q9HC36 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRM3Q9HC36 TUBB1P2-201ENST00000422712 1306 ntBASIC14.4□□□□□ -0.1
MRM3Q9HC36 TUBB1P1-201ENST00000503144 1300 ntBASIC14.4□□□□□ -0.1
MRM3Q9HC36 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 FAM90A12P-201ENST00000519497 2375 ntBASIC14.39□□□□□ -0.11
MRM3Q9HC36 FAM90A24P-201ENST00000520792 2369 ntBASIC14.39□□□□□ -0.11
MRM3Q9HC36 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 VDAC1P1-201ENST00000439229 848 ntBASIC14.39□□□□□ -0.11
MRM3Q9HC36 MTX1P1-201ENST00000440904 838 ntBASIC14.39□□□□□ -0.11
MRM3Q9HC36 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 AC092658.1-201ENST00000505836 891 ntBASIC14.39□□□□□ -0.11
MRM3Q9HC36 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.39□□□□□ -0.11
MRM3Q9HC36 AL590824.1-201ENST00000403828 1349 ntBASIC14.39□□□□□ -0.11
MRM3Q9HC36 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRM3Q9HC36 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 MARK2P9-201ENST00000430958 1727 ntBASIC14.38□□□□□ -0.11
MRM3Q9HC36 AC018629.1-201ENST00000623381 1736 ntBASIC14.38□□□□□ -0.11
MRM3Q9HC36 NCLP1-201ENST00000445357 1963 ntBASIC14.38□□□□□ -0.11
MRM3Q9HC36 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 KRT8P29-201ENST00000420409 1371 ntBASIC14.38□□□□□ -0.11
MRM3Q9HC36 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MRM3Q9HC36 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MRM3Q9HC36 AC092580.1-201ENST00000433998 658 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms