Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 MIR663B-201ENST00000408361 115 ntBASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 GPAA1P2-201ENST00000417923 928 ntBASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 POM121L10P-201ENST00000436994 1285 ntBASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 KRT8P13-201ENST00000463294 1010 ntBASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 MIR3615-201ENST00000581999 87 ntBASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AC103810.3-201ENST00000583567 96 ntBASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 AC003102.2-201ENST00000589195 1469 ntBASIC12.21□□□□□ -0.46
PCGF1Q9BSM1 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 RN7SKP230-201ENST00000365642 335 ntBASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 AL358472.3-201ENST00000608147 415 ntBASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.2□□□□□ -0.46
PCGF1Q9BSM1 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms