Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FYCO1Q9BQS8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
FYCO1Q9BQS8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FYCO1Q9BQS8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 MIR1301-201ENST00000408518 82 ntBASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 AC005777.1-201ENST00000588332 187 ntBASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FYCO1Q9BQS8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AC106881.1-201ENST00000605849 3329 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AC132812.1-201ENST00000583145 892 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 GOLGA8IP-202ENST00000611635 2100 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AC061965.1-201ENST00000560524 1465 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AC005912.2-201ENST00000619492 2400 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 PTGER4P2-201ENST00000328411 252 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 PIFO-201ENST00000369737 746 ntTSL 2 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 PTGER4P3-201ENST00000458150 252 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 AC073869.4-201ENST00000620841 800 ntBASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 ESR1-214ENST00000638569 132 ntTSL 5 BASIC21.71■■□□□ 1.07
FYCO1Q9BQS8 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 GALP-202ENST00000440823 889 ntTSL 5 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 RN7SL128P-201ENST00000467883 305 ntBASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 RN7SL351P-201ENST00000469306 248 ntBASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 AC092862.1-201ENST00000541534 533 ntBASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC21.7■■□□□ 1.06
FYCO1Q9BQS8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms