Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 AL022313.4-201ENST00000562756 2046 ntBASIC11.76□□□□□ -0.53
RAB40CQ96S21 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.75□□□□□ -0.53
RAB40CQ96S21 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 AC092580.3-201ENST00000430932 139 ntBASIC11.75□□□□□ -0.53
RAB40CQ96S21 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.75□□□□□ -0.53
RAB40CQ96S21 RN7SL399P-201ENST00000471648 279 ntBASIC11.75□□□□□ -0.53
RAB40CQ96S21 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 AC027237.1-201ENST00000560942 655 ntBASIC11.75□□□□□ -0.53
RAB40CQ96S21 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 BX088702.1-201ENST00000610784 235 ntBASIC11.75□□□□□ -0.53
RAB40CQ96S21 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 AC093512.1-201ENST00000617969 520 ntBASIC11.75□□□□□ -0.53
RAB40CQ96S21 AL590560.3-201ENST00000623350 461 ntBASIC11.75□□□□□ -0.53
RAB40CQ96S21 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.75□□□□□ -0.53
RAB40CQ96S21 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RAB40CQ96S21 AL805961.2-201ENST00000642139 4817 ntBASIC11.75□□□□□ -0.53
RAB40CQ96S21 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 OR2I1P-208ENST00000641137 4948 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms