Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 AC090502.4-201ENST00000551714 1386 ntBASIC16.88■□□□□ 0.29
TRIM47Q96LD4 IL9RP3-201ENST00000442856 1674 ntBASIC16.88■□□□□ 0.29
TRIM47Q96LD4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 ALG3P1-201ENST00000508806 1114 ntBASIC16.87■□□□□ 0.29
TRIM47Q96LD4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 MIR3188-201ENST00000583494 85 ntBASIC16.87■□□□□ 0.29
TRIM47Q96LD4 AC133540.1-201ENST00000620845 1019 ntBASIC16.87■□□□□ 0.29
TRIM47Q96LD4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 LINC00431-202ENST00000636375 159 ntBASIC16.87■□□□□ 0.29
TRIM47Q96LD4 AP001184.1-201ENST00000637936 376 ntBASIC16.87■□□□□ 0.29
TRIM47Q96LD4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 AC018442.1-201ENST00000421439 2061 ntBASIC16.87■□□□□ 0.29
TRIM47Q96LD4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM47Q96LD4 AC003102.2-201ENST00000589195 1469 ntBASIC16.86■□□□□ 0.29
TRIM47Q96LD4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 TSPY25P-201ENST00000429463 745 ntBASIC16.86■□□□□ 0.29
TRIM47Q96LD4 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 FTH1P22-201ENST00000456305 520 ntBASIC16.86■□□□□ 0.29
TRIM47Q96LD4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 RN7SL81P-201ENST00000493781 261 ntBASIC16.86■□□□□ 0.29
TRIM47Q96LD4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 MIR3180-2-201ENST00000581748 88 ntBASIC16.86■□□□□ 0.29
TRIM47Q96LD4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM47Q96LD4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM47Q96LD4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms