Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 HILS1-202ENST00000545329 423 ntBASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 AL139385.1-201ENST00000611744 3272 ntBASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHAMP1Q96JM3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 PCDHB19P-202ENST00000625133 2914 ntBASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 AC004945.1-201ENST00000416738 983 ntBASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 AL162726.2-201ENST00000438986 1017 ntBASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 ALG3P1-201ENST00000508806 1114 ntBASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 AC097376.2-205ENST00000610159 5334 ntBASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 MARK2P9-201ENST00000430958 1727 ntBASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHAMP1Q96JM3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHAMP1Q96JM3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHAMP1Q96JM3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms