Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 YBX2P1-201ENST00000394192 760 ntBASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 ATP5G2P1-201ENST00000433580 426 ntBASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 AC103988.2-201ENST00000561804 725 ntBASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 AP000842.3-202ENST00000569238 1080 ntBASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 AC093525.8-201ENST00000624099 1342 ntBASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 AL358781.1-202ENST00000321081 1360 ntBASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 AC011700.1-201ENST00000610409 2627 ntBASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CHCHD1Q96BP2 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 RNPS1P1-201ENST00000507437 918 ntBASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 AC000095.1-201ENST00000603208 874 ntBASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 AC099522.2-201ENST00000607001 744 ntBASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 TP73-AS1-207ENST00000624167 988 ntBASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 BCAR1-209ENST00000546196 1340 ntBASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 AC139712.1-201ENST00000378256 1875 ntBASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 KRT8P12-202ENST00000472924 1397 ntBASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 HSPA8P9-201ENST00000485881 1943 ntBASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHCHD1Q96BP2 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms