Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 RN7SL8P-201ENST00000461771 266 ntBASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 AP002803.1-201ENST00000528836 498 ntBASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 AC135983.4-201ENST00000564116 1262 ntBASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 AL031713.1-201ENST00000564813 661 ntBASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 AC005632.3-201ENST00000605544 308 ntBASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 AL022334.2-201ENST00000610000 484 ntBASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ATP6V0A1Q93050 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 MIR557-201ENST00000385239 98 ntBASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 AL807761.2-201ENST00000422849 729 ntBASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 RPL7P35-201ENST00000446943 740 ntBASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 DUX4L50-201ENST00000455245 715 ntBASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 AC007326.1-201ENST00000604539 458 ntBASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ATP6V0A1Q93050 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 AC097359.2-201ENST00000604992 2389 ntBASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATP6V0A1Q93050 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ATP6V0A1Q93050 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms