Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 FXNP2-201ENST00000411625 547 ntBASIC13.69□□□□□ -0.22
TM9SF4Q92544 TLE1P1-201ENST00000422965 589 ntBASIC13.69□□□□□ -0.22
TM9SF4Q92544 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 AL132994.2-201ENST00000603120 687 ntBASIC13.69□□□□□ -0.22
TM9SF4Q92544 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF4Q92544 AL157414.3-201ENST00000624276 1954 ntBASIC13.69□□□□□ -0.22
TM9SF4Q92544 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TM9SF4Q92544 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 EEF1DP6-201ENST00000449232 372 ntBASIC13.68□□□□□ -0.22
TM9SF4Q92544 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 AC079336.7-201ENST00000623428 1078 ntBASIC13.68□□□□□ -0.22
TM9SF4Q92544 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF4Q92544 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 CICP20-201ENST00000443330 2801 ntBASIC13.68□□□□□ -0.22
TM9SF4Q92544 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF4Q92544 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.67□□□□□ -0.22
TM9SF4Q92544 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM9SF4Q92544 MST1P2-201ENST00000457982 2291 ntBASIC13.67□□□□□ -0.22
TM9SF4Q92544 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.67□□□□□ -0.22
TM9SF4Q92544 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.67□□□□□ -0.22
TM9SF4Q92544 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.67□□□□□ -0.22
TM9SF4Q92544 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM9SF4Q92544 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.67□□□□□ -0.22
TM9SF4Q92544 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM9SF4Q92544 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TM9SF4Q92544 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms