Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 RNU1-114P-201ENST00000365297 166 ntBASIC12.57□□□□□ -0.4
CCDC107Q8WV48 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 AL139094.1-201ENST00000405549 1188 ntBASIC12.57□□□□□ -0.4
CCDC107Q8WV48 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 SERBP1P5-201ENST00000510079 1181 ntBASIC12.57□□□□□ -0.4
CCDC107Q8WV48 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 AC004233.3-201ENST00000607794 1269 ntBASIC12.57□□□□□ -0.4
CCDC107Q8WV48 AC093726.1-201ENST00000608064 963 ntBASIC12.57□□□□□ -0.4
CCDC107Q8WV48 AC009118.2-201ENST00000613275 655 ntBASIC12.57□□□□□ -0.4
CCDC107Q8WV48 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 AC215219.1-201ENST00000400706 1817 ntBASIC12.57□□□□□ -0.4
CCDC107Q8WV48 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CCDC107Q8WV48 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms