Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 USP17L6P-201ENST00000382470 1197 ntBASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 GAPDHP40-201ENST00000505218 1006 ntBASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 UNC93B7-201ENST00000509439 705 ntBASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 AC092865.6-201ENST00000642101 219 ntBASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMIM11BQ8TCY0 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 CD81-202ENST00000381036 880 ntTSL 3 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 UPK3BP1-201ENST00000428678 509 ntBASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 AK2P2-201ENST00000439142 405 ntBASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 DUX4L47-201ENST00000566374 394 ntBASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC9.38□□□□□ -0.91
SMIM11BQ8TCY0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms