Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 FAM90A2P-201ENST00000511144 1395 ntBASIC15.47■□□□□ 0.07
BEST2Q8NFU1 FAM90A25P-201ENST00000528404 1395 ntBASIC15.47■□□□□ 0.07
BEST2Q8NFU1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.47■□□□□ 0.07
BEST2Q8NFU1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 AC092053.3-201ENST00000641308 4975 ntBASIC15.46■□□□□ 0.07
BEST2Q8NFU1 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 KRT18P9-201ENST00000604826 1300 ntBASIC15.46■□□□□ 0.07
BEST2Q8NFU1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 CEP164P1-201ENST00000455142 418 ntBASIC15.46■□□□□ 0.07
BEST2Q8NFU1 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 KRT8P1-201ENST00000557533 1207 ntBASIC15.46■□□□□ 0.07
BEST2Q8NFU1 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 AC012617.1-204ENST00000586340 2305 ntBASIC15.46■□□□□ 0.07
BEST2Q8NFU1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST2Q8NFU1 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.46■□□□□ 0.06
BEST2Q8NFU1 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
BEST2Q8NFU1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
BEST2Q8NFU1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
BEST2Q8NFU1 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 HSPA8P5-201ENST00000456928 2069 ntBASIC15.45■□□□□ 0.06
BEST2Q8NFU1 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 AC005912.2-201ENST00000619492 2400 ntBASIC15.45■□□□□ 0.06
BEST2Q8NFU1 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 SBF1P1-201ENST00000444527 5631 ntBASIC15.45■□□□□ 0.06
BEST2Q8NFU1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 KRT17P5-201ENST00000332088 839 ntBASIC15.45■□□□□ 0.06
BEST2Q8NFU1 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.45■□□□□ 0.06
BEST2Q8NFU1 RPSAP15-201ENST00000448168 861 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms