Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 FMO6P-201ENST00000236166 1620 ntBASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 MIR611-201ENST00000384869 67 ntBASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 MIR2278-201ENST00000516344 96 ntBASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 RHOQP2-201ENST00000449922 579 ntBASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 AC108724.1-201ENST00000481669 352 ntBASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 BMF-206ENST00000558774 671 ntTSL 3 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 RN7SL121P-201ENST00000584223 273 ntBASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 AC010531.8-201ENST00000623341 685 ntBASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 AC245369.7-201ENST00000631386 350 ntBASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP43Q8NDM7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 FAU-201ENST00000279259 461 ntTSL 2 BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 AK2P2-201ENST00000439142 405 ntBASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 COQ10BP2-201ENST00000513804 724 ntBASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 CSTP2-201ENST00000610599 398 ntBASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 AC020931.1-201ENST00000589622 1346 ntBASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC21.78■■□□□ 1.08
CFAP43Q8NDM7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 OLA1P2-201ENST00000395519 1264 ntBASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 MAGEA7P-201ENST00000436482 942 ntBASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 NALT1-202ENST00000450304 437 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 RN7SL351P-201ENST00000469306 248 ntBASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP43Q8NDM7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CFAP43Q8NDM7 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 FDPSP7-201ENST00000429043 1054 ntBASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 AC025594.1-201ENST00000469533 543 ntBASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 AC132825.4-202ENST00000578792 434 ntBASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.76■■□□□ 1.07
CFAP43Q8NDM7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms