Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AL157407.1-201ENST00000435784 904 ntBASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 HOMER2P2-201ENST00000451621 847 ntBASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AC100850.1-201ENST00000506768 649 ntBASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AP000812.2-201ENST00000538934 718 ntBASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 DUX4L46-201ENST00000566845 751 ntBASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AC244394.1-201ENST00000435000 1665 ntBASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 AC073548.1-201ENST00000624088 1882 ntBASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 PPT1-213ENST00000641319 2388 ntBASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC83Q8IWF9 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC83Q8IWF9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC83Q8IWF9 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC83Q8IWF9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC83Q8IWF9 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 AC005252.3-201ENST00000623855 2258 ntBASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 RPL7P3-201ENST00000441388 714 ntBASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 MIR3197-201ENST00000582241 73 ntBASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 MIR6720-201ENST00000611664 98 ntBASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC83Q8IWF9 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC83Q8IWF9 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC83Q8IWF9 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC83Q8IWF9 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms