Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 AP002803.1-201ENST00000528836 498 ntBASIC16.04■□□□□ 0.16
TRIM50Q86XT4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 AC009560.1-201ENST00000620208 434 ntBASIC16.04■□□□□ 0.16
TRIM50Q86XT4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TRIM50Q86XT4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 AC073869.2-201ENST00000417338 1026 ntBASIC16.03■□□□□ 0.16
TRIM50Q86XT4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 AP001267.2-201ENST00000532619 2086 ntBASIC16.03■□□□□ 0.16
TRIM50Q86XT4 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM50Q86XT4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM50Q86XT4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms