Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AC144522.1-201ENST00000625111 1658 ntBASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AC004899.1-201ENST00000424687 1714 ntBASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AL008707.1-201ENST00000422498 534 ntBASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AL161932.2-201ENST00000435436 679 ntBASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 RNMTL1P1-201ENST00000454103 560 ntBASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AC006122.1-201ENST00000493323 440 ntBASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AC140658.4-201ENST00000561990 352 ntBASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AC005730.2-201ENST00000564549 1184 ntBASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 NKG7-204ENST00000595217 816 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 TMBIM7P-202ENST00000641474 1516 ntBASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC144NLQ6NUI1 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC11.74□□□□□ -0.53
CCDC144NLQ6NUI1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms