Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AC010086.2-201ENST00000428616 226 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AC011431.1-201ENST00000512971 230 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 RN7SL524P-201ENST00000581152 300 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AC015813.5-201ENST00000624641 1514 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 HSD3BP1-201ENST00000286193 1111 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 OR7E155P-201ENST00000412208 1014 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 AL353622.2-201ENST00000605846 425 ntBASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS13DQ5THJ4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13DQ5THJ4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13DQ5THJ4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13DQ5THJ4 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
VPS13DQ5THJ4 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13DQ5THJ4 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.92
VPS13DQ5THJ4 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC9.27□□□□□ -0.92
VPS13DQ5THJ4 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC9.27□□□□□ -0.92
VPS13DQ5THJ4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS13DQ5THJ4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 PEBP1P3-201ENST00000455475 548 ntBASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 HMGA1P1-201ENST00000415560 1062 ntBASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 ASLP1-201ENST00000428790 637 ntBASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 POLR2LP1-206ENST00000444785 187 ntBASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 SNRPD2P2-201ENST00000473818 333 ntBASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 OR52V1P-201ENST00000515557 898 ntBASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 AP006248.1-201ENST00000610471 67 ntBASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
VPS13DQ5THJ4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 MIR1226-201ENST00000408658 75 ntBASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 AP000533.1-201ENST00000456143 1177 ntBASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 AC040160.2-201ENST00000623816 1675 ntBASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS13DQ5THJ4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms