Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 AC018635.1-201ENST00000468292 1030 ntBASIC15.31■□□□□ 0.04
VARS2Q5ST30 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 AC092171.5-201ENST00000608012 942 ntBASIC15.31■□□□□ 0.04
VARS2Q5ST30 AC242376.2-201ENST00000619355 883 ntBASIC15.31■□□□□ 0.04
VARS2Q5ST30 YRDCP1-201ENST00000621419 643 ntBASIC15.31■□□□□ 0.04
VARS2Q5ST30 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 BRD7P5-201ENST00000299197 1822 ntBASIC15.3■□□□□ 0.04
VARS2Q5ST30 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 AC087045.2-201ENST00000606279 1003 ntBASIC15.3■□□□□ 0.04
VARS2Q5ST30 MIR6074-201ENST00000612054 107 ntBASIC15.3■□□□□ 0.04
VARS2Q5ST30 AC064801.2-201ENST00000625052 1303 ntBASIC15.3■□□□□ 0.04
VARS2Q5ST30 AL590396.2-201ENST00000636511 1041 ntBASIC15.3■□□□□ 0.04
VARS2Q5ST30 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
VARS2Q5ST30 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARS2Q5ST30 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
VARS2Q5ST30 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARS2Q5ST30 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms