Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 RN7SL788P-201ENST00000460504 316 ntBASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 ALG1L6P-201ENST00000515248 758 ntBASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 AC012073.1-201ENST00000606114 1108 ntBASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHROOM1Q2M3G4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 PGAM1P12-201ENST00000505622 748 ntBASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 IGHV1-12-201ENST00000518307 205 ntBASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 KRT8P2-201ENST00000556193 944 ntBASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 AC140113.1-201ENST00000603467 169 ntBASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 AC091769.1-201ENST00000619576 568 ntBASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 AC019109.1-201ENST00000401725 1874 ntBASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
SHROOM1Q2M3G4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 AC006987.1-201ENST00000413610 527 ntBASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 BX679664.3-201ENST00000414070 555 ntBASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 PPP1R2P4-201ENST00000424051 595 ntBASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 AC113935.1-201ENST00000471722 555 ntBASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 MIR6756-201ENST00000616240 63 ntBASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 LINC00244-201ENST00000625073 613 ntBASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms