Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 AC012645.4-201ENST00000610691 1061 ntBASIC13.26□□□□□ -0.29
PUDPQ08623 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PUDPQ08623 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.26□□□□□ -0.29
PUDPQ08623 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.26□□□□□ -0.29
PUDPQ08623 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.26□□□□□ -0.29
PUDPQ08623 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.26□□□□□ -0.29
PUDPQ08623 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PUDPQ08623 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
PUDPQ08623 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PUDPQ08623 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PUDPQ08623 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.26□□□□□ -0.29
PUDPQ08623 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.26□□□□□ -0.29
PUDPQ08623 AC073869.1-201ENST00000415574 2762 ntBASIC13.26□□□□□ -0.29
PUDPQ08623 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PUDPQ08623 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PUDPQ08623 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
PUDPQ08623 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PUDPQ08623 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 AC011474.4-201ENST00000623523 2076 ntBASIC13.25□□□□□ -0.29
PUDPQ08623 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PUDPQ08623 CSPG4P11-201ENST00000560634 4910 ntBASIC13.25□□□□□ -0.29
PUDPQ08623 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
PUDPQ08623 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
PUDPQ08623 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.25□□□□□ -0.29
PUDPQ08623 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.25□□□□□ -0.29
PUDPQ08623 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.25□□□□□ -0.29
PUDPQ08623 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.25□□□□□ -0.29
PUDPQ08623 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.25□□□□□ -0.29
PUDPQ08623 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.25□□□□□ -0.29
PUDPQ08623 AC078819.1-201ENST00000547454 765 ntBASIC13.25□□□□□ -0.29
PUDPQ08623 AC012085.1-201ENST00000548270 765 ntBASIC13.25□□□□□ -0.29
PUDPQ08623 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 AC103988.2-201ENST00000561804 725 ntBASIC13.25□□□□□ -0.29
PUDPQ08623 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.25□□□□□ -0.29
PUDPQ08623 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.25□□□□□ -0.29
PUDPQ08623 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PUDPQ08623 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.25□□□□□ -0.29
PUDPQ08623 MIR6074-201ENST00000612054 107 ntBASIC13.25□□□□□ -0.29
PUDPQ08623 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.25□□□□□ -0.29
PUDPQ08623 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.25□□□□□ -0.29
PUDPQ08623 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PUDPQ08623 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.25□□□□□ -0.29
PUDPQ08623 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.25□□□□□ -0.29
PUDPQ08623 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
PUDPQ08623 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PUDPQ08623 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PUDPQ08623 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PUDPQ08623 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PUDPQ08623 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PUDPQ08623 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.24□□□□□ -0.29
PUDPQ08623 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PUDPQ08623 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.24□□□□□ -0.29
PUDPQ08623 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.24□□□□□ -0.29
PUDPQ08623 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PUDPQ08623 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PUDPQ08623 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms