Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 AC114812.1-204ENST00000449669 728 ntBASIC13.74□□□□□ -0.21
CHRNB3Q05901 GAPDHP21-201ENST00000450301 1010 ntBASIC13.74□□□□□ -0.21
CHRNB3Q05901 RN7SL692P-201ENST00000464677 288 ntBASIC13.74□□□□□ -0.21
CHRNB3Q05901 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 DOC2GP-202ENST00000514950 1163 ntBASIC13.74□□□□□ -0.21
CHRNB3Q05901 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 AC140912.1-201ENST00000577171 1054 ntBASIC13.74□□□□□ -0.21
CHRNB3Q05901 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 AC139712.1-201ENST00000378256 1875 ntBASIC13.74□□□□□ -0.21
CHRNB3Q05901 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHRNB3Q05901 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CHRNB3Q05901 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 KRT17P7-201ENST00000451704 1104 ntBASIC13.73□□□□□ -0.21
CHRNB3Q05901 GIMAP3P-201ENST00000495150 836 ntBASIC13.73□□□□□ -0.21
CHRNB3Q05901 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 AC004840.1-201ENST00000636359 365 ntBASIC13.73□□□□□ -0.21
CHRNB3Q05901 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHRNB3Q05901 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.73□□□□□ -0.21
CHRNB3Q05901 PTPRVP-205ENST00000641549 5067 ntBASIC13.72□□□□□ -0.21
CHRNB3Q05901 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRNB3Q05901 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRNB3Q05901 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRNB3Q05901 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRNB3Q05901 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRNB3Q05901 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRNB3Q05901 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRNB3Q05901 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRNB3Q05901 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CHRNB3Q05901 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.72□□□□□ -0.21
CHRNB3Q05901 AL138725.1-201ENST00000407347 1314 ntBASIC13.72□□□□□ -0.21
CHRNB3Q05901 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRNB3Q05901 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHRNB3Q05901 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.72□□□□□ -0.21
CHRNB3Q05901 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRNB3Q05901 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRNB3Q05901 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.72□□□□□ -0.21
CHRNB3Q05901 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHRNB3Q05901 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms