Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.02□□□□□ -0.33
CDK5Q00535 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.02□□□□□ -0.33
CDK5Q00535 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 MIR4683-201ENST00000579659 81 ntBASIC13.02□□□□□ -0.33
CDK5Q00535 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CDK5Q00535 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.02□□□□□ -0.33
CDK5Q00535 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CDK5Q00535 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.02□□□□□ -0.33
CDK5Q00535 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.02□□□□□ -0.33
CDK5Q00535 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 AC024075.2-201ENST00000598112 1473 ntBASIC13.02□□□□□ -0.33
CDK5Q00535 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CDK5Q00535 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CDK5Q00535 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
CDK5Q00535 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDK5Q00535 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.02□□□□□ -0.33
CDK5Q00535 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CDK5Q00535 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CDK5Q00535 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.01□□□□□ -0.33
CDK5Q00535 FAM8A4P-201ENST00000435433 1213 ntBASIC13.01□□□□□ -0.33
CDK5Q00535 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.01□□□□□ -0.33
CDK5Q00535 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 INGX-202ENST00000489074 768 ntBASIC13.01□□□□□ -0.33
CDK5Q00535 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.01□□□□□ -0.33
CDK5Q00535 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.01□□□□□ -0.33
CDK5Q00535 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 OR10B1P-201ENST00000601666 907 ntBASIC13.01□□□□□ -0.33
CDK5Q00535 AC008494.3-201ENST00000606615 944 ntBASIC13.01□□□□□ -0.33
CDK5Q00535 AC004233.3-201ENST00000607794 1269 ntBASIC13.01□□□□□ -0.33
CDK5Q00535 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 AL445250.1-201ENST00000641671 2259 ntBASIC13.01□□□□□ -0.33
CDK5Q00535 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
CDK5Q00535 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDK5Q00535 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.01□□□□□ -0.33
CDK5Q00535 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13□□□□□ -0.33
CDK5Q00535 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13□□□□□ -0.33
CDK5Q00535 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13□□□□□ -0.33
CDK5Q00535 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13□□□□□ -0.33
CDK5Q00535 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13□□□□□ -0.33
CDK5Q00535 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13□□□□□ -0.33
CDK5Q00535 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13□□□□□ -0.33
CDK5Q00535 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CDK5Q00535 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 TUBB4AP1-201ENST00000450755 1325 ntBASIC13□□□□□ -0.33
CDK5Q00535 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDK5Q00535 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms