Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP1P78357 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.81■□□□□ 0.28
CNTNAP1P78357 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP1P78357 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP1P78357 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP1P78357 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP1P78357 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP1P78357 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP1P78357 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.8■□□□□ 0.28
CNTNAP1P78357 AC006328.1-201ENST00000437571 379 ntBASIC16.8■□□□□ 0.28
CNTNAP1P78357 AC147876.1-201ENST00000504408 322 ntBASIC16.8■□□□□ 0.28
CNTNAP1P78357 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 ACY3-202ENST00000529256 933 ntTSL 3 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 MIR4265-201ENST00000582152 99 ntBASIC16.8■□□□□ 0.28
CNTNAP1P78357 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC16.8■□□□□ 0.28
CNTNAP1P78357 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 AC126177.1-201ENST00000547829 2218 ntBASIC16.8■□□□□ 0.28
CNTNAP1P78357 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP1P78357 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP1P78357 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 HLA-DMA-202ENST00000395303 1007 ntBASIC16.79■□□□□ 0.28
CNTNAP1P78357 RPL3P2-204ENST00000413027 1203 ntBASIC16.79■□□□□ 0.28
CNTNAP1P78357 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 SNRPCP15-201ENST00000424055 192 ntBASIC16.79■□□□□ 0.28
CNTNAP1P78357 AP000244.1-201ENST00000424582 201 ntBASIC16.79■□□□□ 0.28
CNTNAP1P78357 AC092573.1-201ENST00000433054 884 ntBASIC16.79■□□□□ 0.28
CNTNAP1P78357 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 AC007952.5-201ENST00000572818 1486 ntBASIC16.79■□□□□ 0.28
CNTNAP1P78357 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CNTNAP1P78357 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP1P78357 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms