Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 AC073548.1-201ENST00000624088 1882 ntBASIC11.85□□□□□ -0.51
SPCS3P61009 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.84□□□□□ -0.51
SPCS3P61009 CSPG4P11-201ENST00000560634 4910 ntBASIC11.84□□□□□ -0.51
SPCS3P61009 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
SPCS3P61009 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SPCS3P61009 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SPCS3P61009 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.84□□□□□ -0.51
SPCS3P61009 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 SPDYE19P-201ENST00000338590 713 ntBASIC11.84□□□□□ -0.51
SPCS3P61009 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SPCS3P61009 ACTBP8-201ENST00000403258 1108 ntBASIC11.84□□□□□ -0.51
SPCS3P61009 AC004945.1-201ENST00000416738 983 ntBASIC11.84□□□□□ -0.51
SPCS3P61009 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.84□□□□□ -0.51
SPCS3P61009 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.84□□□□□ -0.51
SPCS3P61009 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.84□□□□□ -0.51
SPCS3P61009 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.84□□□□□ -0.51
SPCS3P61009 SORD2P-201ENST00000558556 1069 ntBASIC11.84□□□□□ -0.51
SPCS3P61009 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.84□□□□□ -0.51
SPCS3P61009 AC099568.2-201ENST00000609194 695 ntBASIC11.84□□□□□ -0.51
SPCS3P61009 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.84□□□□□ -0.51
SPCS3P61009 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 AC139712.1-201ENST00000378256 1875 ntBASIC11.84□□□□□ -0.51
SPCS3P61009 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.84□□□□□ -0.51
SPCS3P61009 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.84□□□□□ -0.51
SPCS3P61009 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 AC010536.1-201ENST00000538868 2611 ntBASIC11.84□□□□□ -0.51
SPCS3P61009 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
SPCS3P61009 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SPCS3P61009 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.84□□□□□ -0.51
SPCS3P61009 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.84□□□□□ -0.51
SPCS3P61009 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.84□□□□□ -0.51
SPCS3P61009 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
SPCS3P61009 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SPCS3P61009 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
SPCS3P61009 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SPCS3P61009 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SPCS3P61009 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SPCS3P61009 AC010969.2-201ENST00000602458 3231 ntBASIC11.83□□□□□ -0.52
SPCS3P61009 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.83□□□□□ -0.52
SPCS3P61009 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.83□□□□□ -0.52
SPCS3P61009 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
SPCS3P61009 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SPCS3P61009 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms