Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RHBDL3P58872 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 AL590824.1-201ENST00000403828 1349 ntBASIC16.77■□□□□ 0.28
RHBDL3P58872 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RHBDL3P58872 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RHBDL3P58872 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.77■□□□□ 0.28
RHBDL3P58872 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.77■□□□□ 0.28
RHBDL3P58872 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.77■□□□□ 0.28
RHBDL3P58872 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.77■□□□□ 0.28
RHBDL3P58872 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.77■□□□□ 0.28
RHBDL3P58872 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 AC006529.1-201ENST00000459978 637 ntBASIC16.77■□□□□ 0.28
RHBDL3P58872 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 AC025186.1-201ENST00000478174 870 ntBASIC16.77■□□□□ 0.28
RHBDL3P58872 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.77■□□□□ 0.28
RHBDL3P58872 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RHBDL3P58872 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 AL359091.4-201ENST00000610052 409 ntBASIC16.77■□□□□ 0.28
RHBDL3P58872 AC006158.1-201ENST00000610661 249 ntBASIC16.77■□□□□ 0.28
RHBDL3P58872 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDL3P58872 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RHBDL3P58872 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.77■□□□□ 0.28
RHBDL3P58872 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDL3P58872 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.77■□□□□ 0.27
RHBDL3P58872 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDL3P58872 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDL3P58872 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.77■□□□□ 0.27
RHBDL3P58872 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RHBDL3P58872 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDL3P58872 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.77■□□□□ 0.27
RHBDL3P58872 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RHBDL3P58872 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDL3P58872 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RHBDL3P58872 BX640514.1-201ENST00000583223 1918 ntBASIC16.76■□□□□ 0.27
RHBDL3P58872 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 AC015909.5-201ENST00000624336 2266 ntBASIC16.76■□□□□ 0.27
RHBDL3P58872 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.76■□□□□ 0.27
RHBDL3P58872 LINC02228-204ENST00000642115 2962 ntBASIC16.76■□□□□ 0.27
RHBDL3P58872 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 AC004554.1-201ENST00000422830 1468 ntBASIC16.76■□□□□ 0.27
RHBDL3P58872 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RHBDL3P58872 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.76■□□□□ 0.27
RHBDL3P58872 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.76■□□□□ 0.27
RHBDL3P58872 RN7SL396P-201ENST00000471086 295 ntBASIC16.76■□□□□ 0.27
RHBDL3P58872 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.76■□□□□ 0.27
RHBDL3P58872 AC093909.3-201ENST00000504783 336 ntBASIC16.76■□□□□ 0.27
RHBDL3P58872 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RHBDL3P58872 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.76■□□□□ 0.27
RHBDL3P58872 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.76■□□□□ 0.27
RHBDL3P58872 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.76■□□□□ 0.27
RHBDL3P58872 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
RHBDL3P58872 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.76■□□□□ 0.27
RHBDL3P58872 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.76■□□□□ 0.27
RHBDL3P58872 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.76■□□□□ 0.27
RHBDL3P58872 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDL3P58872 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RHBDL3P58872 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RHBDL3P58872 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RHBDL3P58872 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.75■□□□□ 0.27
RHBDL3P58872 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RHBDL3P58872 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDL3P58872 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms